Aplos vs FreshBooks Pricing (2026)

How do these two stack up on price? Here's what each one costs, what you get, and where the value sits.

Aplos FreshBooks
Starts at $79/mo $23/mo
Number of plans 4 4
Free plan
Free trial
Pricing model flat-rate per-seat

Lite

$79/mo
  • Income Statement By Fund
  • Bank Reconciliation

Core

$129/mo
  • Basic Budgeting
  • Accounts Payable

Advanced

$229/mo
  • Budgeting By Fund/Grant
  • Budgeting By Department

Custom

Custom
  • Income & Expense Allocations

Lite

$23/mo
  • Send invoices to 5 clients
  • Track expenses in real time
  • Create and send estimates
  • Get paid with credit and debit cards, ACH bank transfer, Apple Pay, Google Pay, and Buy Now, Pay Later
  • Generate tax-time reports

Plus

Popular
$43/mo
  • Send invoices to 50 clients
  • Track expenses in real time
  • Create estimates, proposals, and client retainers
  • Get paid with credit and debit cards, ACH bank transfer, Apple Pay, Google Pay, and Buy Now, Pay Later
  • Generate tax-time reports
  • Run financial and accounting reports
  • Expense receipt scanning
  • Give your accountant access

Premium

$70/mo
  • Send invoices to unlimited clients
  • Track expenses in real time
  • Create estimates, proposals, and client retainers
  • Get paid with credit and debit cards, ACH bank transfer, Apple Pay, Google Pay, and Buy Now, Pay Later
  • Generate tax-time reports
  • Run financial and accounting reports
  • Bill receipt scanning with the ability to add line items
  • Give your accountant access
  • Check project profitability
  • Customize your email templates

Select

Custom
  • Send invoices to unlimited clients
  • Track expenses in real time
  • Create estimates, proposals, and client retainers
  • Access lower credit card transaction fees and capped bank transfer (ACH) fees
  • Generate tax-time reports
  • Run financial and accounting reports
  • Bill receipt scanning with automatic capture of multi-line items
  • Give your accountant access
  • Check project profitability
  • Customize email templates and remove FreshBooks branding
  • Import your data via Easy Switch
  • Gain access to dedicated phone support
  • Add 2 Team Member accounts for no extra charge

Aplos vs FreshBooks FAQ

Which one is cheaper?
FreshBooks is the cheaper option, starting at $23/mo vs $79/mo for Aplos.
Can I use either one for free?
Neither has a free plan. But Aplos and FreshBooks offer a free trial.
How do they charge?
Different approach here. Aplos uses flat-rate pricing, while FreshBooks goes with per-seat. That changes the math depending on your team size and usage.
Which one is a better deal?
Depends on what you need. Aplos: Aplos sits in the low-to-mid range for dedicated nonprofit accounting software, cheaper than heavyweight ERP-style tools but pricier than generic small-business accounting apps repurposed for nonprofits. They're clearly going after small-to-mid nonprofits who've outgrown QuickBooks-for-nonprofits hacks but don't need Blackbaud-level firepower. FreshBooks: FreshBooks sits mid-pack against QuickBooks and Xero — pricier than bare-bones invoicing tools but cheaper than full accounting suites. They're chasing freelancers and service-based small businesses who want something friendlier than QuickBooks without the accounting-department complexity.

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